You sound like a well qualified candidate and the school's graduate advisors should be able to help you determine what would make you stand out. Talking directly to the advisors or faculty would give you more valuable information than any generic opinion I can give here.
for what it's worth, my male classmates got treated well (to be honest at times it actually seemed to the rest of us that they received preferential treatment) so I didn't see being male as a drawback during school. We all got along fine.